Amplicon Sequencing Analysis
  • This analysis pipeline is suitable for high-throughput sequencing data analysis, focusing on amplicon sequencing data (16S rRNA, ITS, 18S rRNA and functional genes).
  • Inter-Domain Ecological Network (IDEN) analysis pipeline is mainly for network analysis of metagenomic data and synchronous plant surveys.
Database Analysis
  • This analysis pipeline is used to model, analyze and manage sequence databases, including protein and nucleic sequences.
  • Not available for now
  • This pipeline is used for antibiotic resistance genes (ARGs) analysis based on the Sequence Database for ARGs (SDARG). The database was last updated in Dec 30, 2016. Both the nucleotide and protein sequences could be downloaded in the Shared Data, Data Libraries at the top of this page. It will keep updating annually, and the 2017 version would be avaliable recently!